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publications

Asynchronous Hatching and Extended Parental Care in Aegla schmitti (Decapoda, Anomura)

Published in Brazilian Archives of Biology and Technology, 2017

We describe the behavior of newly-hatched juveniles and maternal care in Aegla schmitti.

Recommended citation: Adam, C. L., Marochi, M., Lacerda, M., Trevisan, A., & Masunari, S. (2017). Asynchronous Hatching and Extended Parental Care in Aegla schmitti (Decapoda, Anomura). Brazilian Archives of Biology and Technology, 60, e17160372.
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Ontogenetic shape changes and sexual dimorphism in Aegla marginata Bond-Buckup and Buckup, 1994

Published in Anais da Academia Brasileira de Ciencias, 2018

We describe sexual dimorphism in carapace shape during the development of Aegla marginata.

Recommended citation: Adam, C. L., Marochi, M. Z., & Masunari, S. (2018). Ontogenetic shape changes and sexual dimorphism in Aegla marginata Bond-Buckup and Buckup, 1994. Anais da Academia Brasileira de Ciências, 90(02), 1521-1532.
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Genetic structuring and species boundaries in the Atlantic stony coral Favia (Scleractinia, Faviidae)

Published in Zoologica scripta, 2024

We access population structure and species boundaries in the Atlantic stony coral Favia.

Recommended citation: Adam, C. L., Toonen, R. J., Carlon, D. B., Zilberberg, C., & Barbeitos, M. S. (2024). Genetic structuring and species boundaries in the Atlantic stony coral Favia (Scleractinia, Faviidae). Zoologica Scripta, 53(3), 376-394.
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Genetic diversity and population structure of the semiterrestrial crab Armases benedicti (Brachyura, Sesarmidae) along the North Brazilian coast

Published in Crustaceana, 2024

We conduct population genetics and structure analysis of the semiterrestrial crab Armases benedicti along the North Brazilian coast.

Recommended citation: Adam, C. L., Schubart, C. D., Masunari, S., & Marochi, M. Z. (2024). Genetic diversity and population structure of the semiterrestrial crab Armases benedicti (Brachyura, Sesarmidae) along the North Brazilian coast. Crustaceana, 97(5-9), 553-566..
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TRACKing Tandem Repeats: a customizable pipeline for identification and cross-species comparisons

Published in Bioinformatics Advances, 2025

We present TRACK, a user-friendly Snakemake pipeline designed to consolidate the discovery and comparison of tandem repeats (TRs) across species

Recommended citation: Adam, C. L., Rocha, J., Sudmant, P., & Rohlfs, R. (2025). TRACKing tandem repeats: a customizable pipeline for identification and cross-species comparison. Bioinformatics Advances, 5(1), vbaf066.
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Hierarchical Genetic Differentiation and Population Structure in the Semiterrestrial Crab Armases Rubripes (Brachyura, Sesarmidae)

Published in Marine Ecology, 2026

Using cytochrome oxidase 1 (COI) data, our results revealed a potential cryptic species complex in Armases rubripes, with Caribbean and Brazilian regions representing separate evolving lineages.

Recommended citation: Adam, C.L., Thiercelin, N., Wawrschin, L., Masunari, S., Schubart, C.D., & Marochi, M.Z. (2026). Hierarchical Genetic Differentiation and Population Structure in the Semiterrestrial Crab Armases Rubripes (Brachyura, Sesarmidae).
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Comparative genomics of Tandem Repeat variation in apes

Published in BioRxiv, 2026

We create a comprehensive TR catalog for seven T2T ape genomes and leverage long-read, population-level data from humans and chimpanzees to identify TR loci with disproportionate divergence-diversity ratios as targets of natural selection.

Recommended citation: Adam, C.L., Rocha, J., Sudmant, P., Rohlfs, R. (2026). Comparative genomics of Tandem Repeat variation in apes.
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A Statistical Framework to Infer the Mutation Model of Tandem Repeat Variants

Published in BioRxiv, 2026

We propose a computational method that leverages ancestral recombination graph (ARG) to estimate the mutation process that drives the evolution of TR loci.

Recommended citation: Luna, L.G.F., Iturbe, S., Adam, C.L., Pope, N.S., Ortega-Del Vecchyo, D., Rohlfs, R. (2026). A Statistical Framework to Infer the Mutation Model of Tandem Repeat Variants.
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teaching

Teaching experience 1

Undergraduate course, University 1, Department, 2014

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Teaching experience 2

Workshop, University 1, Department, 2015